PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG059720.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 400aa MW: 42910.7 Da PI: 10.6769

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG059720.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.3	4.8e-31	332	390	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYeg+Hnh+ TRIDC5BG059720.3 332 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGDHNHN 390 69***********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDGMVESNRE AVQSCHKVLD LLSNPHGQLV PHKDLLEATG AAVAKFGSLA SKIGNGNGGR 60 QGHARFRQRI KKPMPLFDSN LFRDSPASAA AADAAAAAPP KTSSPGPSTS LQLFPRYQQM 120 EASSSKDPVR IPAAQFPQRM VVENPSVGSN GPARGPPLHL VQPVSVAPPA GTPAPALPAA 180 HLHFIQQQQS YQRFQLMHQM KLQSEMMKRG GHGDHQGGST GAGKGVNLKF DGSNCTGSSS 240 RSFLTSLSME GSMASLDGSR SSRPFQLVSG SQTSSTPEMG LMQQRRRCIG KEDGSGRCAT 300 GSRCHCAKKR KLRIRRSIKV PAISNKVADI PADEFSWRKY GQKPIKGSPH PRGYYKCSSV 360 RGCPARKHVE RCVDDPAMLI VTYEGDHNHN RAAAAQPQPA

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDGMVESNRE AVQSCHKVLD LLSNPHGQLV PHKDLLEATG AAVAKFGSLA SKIGNGNGGR  60
QGHARFRQRI KKPMPLFDSN LFRDSPASAA AADAAAAAPP KTSSPGPSTS LQLFPRYQQM  120
EASSSKDPVR IPAAQFPQRM VVENPSVGSN GPARGPPLHL VQPVSVAPPA GTPAPALPAA  180
HLHFIQQQQS YQRFQLMHQM KLQSEMMKRG GHGDHQGGST GAGKGVNLKF DGSNCTGSSS  240
RSFLTSLSME GSMASLDGSR SSRPFQLVSG SQTSSTPEMG LMQQRRRCIG KEDGSGRCAT  300
GSRCHCAKKR KLRIRRSIKV PAISNKVADI PADEFSWRKY GQKPIKGSPH PRGYYKCSSV  360
RGCPARKHVE RCVDDPAMLI VTYEGDHNHN RAAAAQPQPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	7e-54	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG059720.3