PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG059710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 167aa    MW: 18916.3 Da    PI: 6.9488
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG059710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.3e-06142754
                      HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      +rEr+RR+++ ++++ L  ++ ++   ++   +K +i++ A  YI++L
  TRIDC5BG059710.3  1 MRERQRREKLSQSYADLYAMVSSR---SK---DKNSIVQSAAVYIHEL 42
                      69*********************8...44...5666*********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MRERQRREKL SQSYADLYAM VSSRSKDKNS IVQSAAVYIH ELKVAKEQLQ RRNDELKAKI  60
LGHDEQQQCV KVQFEVDEPS SSVDSMIGAL TRLKSMNVKT RGIHSILSGQ RLTTEMNVET  120
TIAACEVEKA VEEALQEVER NQLPDSEAPF PGSRSAWPQT SHVQNVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-21bHLH family protein