PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG059710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 236aa    MW: 26416.7 Da    PI: 8.2538
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG059710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-0867111554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h +rEr+RR+++ ++++ L  ++ ++      K +K +i++ A  YI++L
  TRIDC5BG059710.2  67 HMMRERQRREKLSQSYADLYAMVSSR-----SKQDKNSIVQSAAVYIHEL 111
                       889**********************8.....6***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
SAFREYRGVG LELPGTARGG TGNGINIHRR MMGVLGRMGP AAEEEERPQH QQQQAAGAVE  60
SSRGFRHMMR ERQRREKLSQ SYADLYAMVS SRSKQDKNSI VQSAAVYIHE LKVAKEQLQR  120
RNDELKAKIL GHDEQQQCVK VQFEVDEPSS SVDSMIGALT RLKSMNVKTR GIHSILSGQR  180
LTTEMNVETT IAACEVEKAV EEALQEVERN QLPDSEAPFP GSRSAWPQTS HVQNVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-26bHLH family protein