PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG059120.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 464aa MW: 49530.3 Da PI: 6.5575

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG059120.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.7	1.6e-16	315	361	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq TRIDC5BG059120.6 315 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKTLQ 361 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSQFVPDWGN MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED 60 EAGLWFPFAL ADSLDKDIFQ DLFCEEPPGA AGVDGASKIG RDGVPVLGDG DRRSSQSSAV 120 SAASDLMPPP KSTHVSCSSR QQSMSLADCG DNAGGFQSDL VQARAGKAAM EEGASSTLSA 180 MGASFCGSNQ VQVQGAVSDH GRAGHATAYG DGGAGSALHS AVGSVNANAR GRGHEATVAS 240 SSGRSNYSFG VTATTTTTTG TEPTSTSNRS SKRKRGLDTE DSESPSEDAE SESLVLERKP 300 PQKLTTARRS RAAEVHNLSE RRRRDRINEK MRALQELIPH CNKTDKASML DEAIEYLKTL 360 QMQVQMMWMG SGMAPPAVMF PGMQMHQYLP QMGPSMARMP FMAPPQQGHG VSLPEQYAHF 420 LGVNPHHHLQ PPAHHHQVPS VRPATAKTVS ISNAPAVFST LPNT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSQFVPDWGN MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED  60
EAGLWFPFAL ADSLDKDIFQ DLFCEEPPGA AGVDGASKIG RDGVPVLGDG DRRSSQSSAV  120
SAASDLMPPP KSTHVSCSSR QQSMSLADCG DNAGGFQSDL VQARAGKAAM EEGASSTLSA  180
MGASFCGSNQ VQVQGAVSDH GRAGHATAYG DGGAGSALHS AVGSVNANAR GRGHEATVAS  240
SSGRSNYSFG VTATTTTTTG TEPTSTSNRS SKRKRGLDTE DSESPSEDAE SESLVLERKP  300
PQKLTTARRS RAAEVHNLSE RRRRDRINEK MRALQELIPH CNKTDKASML DEAIEYLKTL  360
QMQVQMMWMG SGMAPPAVMF PGMQMHQYLP QMGPSMARMP FMAPPQQGHG VSLPEQYAHF  420
LGVNPHHHLQ PPAHHHQVPS VRPATAKTVS ISNAPAVFST LPNT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	320	325	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG059120.6