PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG059120.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 270aa    MW: 29350.9 Da    PI: 10.1459
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG059120.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.87.1e-1796142455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+k Lq
  TRIDC5BG059120.3  96 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKTLQ 142
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
SAVGSVNANA RGRGHEATVA SSSGRSNYSF GVTATTTTTT GTEPTSTSNR SSKRKRGLDT  60
EDSESPSEDA ESESLVLERK PPQKLTTARR SRAAEVHNLS ERRRRDRINE KMRALQELIP  120
HCNKTDKASM LDEAIEYLKT LQMQVQMMWM GSGMAPPAVM FPGMQMHQYL PQMGPSMARM  180
PFMAPPQQGH GVSLPEQYAH FLGVNPHHHL QPPAHHHQHF AQGLGYYPLG AKALQQSPAL  240
HHVSNGNAGG GTPAATANAT PGNAIHPNKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.21e-36bHLH family protein