PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC5BG059070.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LSD

Protein Properties

Length: 80aa MW: 8495.97 Da PI: 9.191

Description

LSD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG059070.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-LSD1	38.4	2e-12	7	31	1	25
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25 C+ Cr +L+YP GApsV+Ca+C ++ TRIDC5BG059070.3 7 CHRCRRVLAYPSGAPSVCCAMCRAI 31 **********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 80 aa Download sequence
MQSQIVCHRC RRVLAYPSGA PSVCCAMCRA ITAVPPPAPG TGLQRDFLSV ALSALASPHA 60 SQRVYTILRC NSGNVALEVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32540.1	3e-13	LSD family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG059070.3