PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG057320.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 204aa MW: 22510.2 Da PI: 9.0594

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG057320.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	51	74	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 +kC+ C+k s+ + H H TRIDC5BG057320.5 51 FKCHVCHKKLSTAGGMAIHVLQvH 74 89**********999999986655 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
AGGRRGPGSG AEREAGMGKK KKRVEKVFCY YCDREFDDEK ILVQHQKAKH FKCHVCHKKL 60 STAGGMAIHV LQVHKESVTK VPNAKPERDS TEIEIFGMQG IPSDVLAAHY GEEEDPSSKV 120 AKVEVPTIRP PIMPNYPIGM PFPPRPYGAA RPMYNPAMMV RPPIWPLQQP QPWFAQQPPV 180 SVPPMIAGGS FTCCPSGFPA FVSC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	49	KKKKRVEKVFCYYCDREFDDEKILVQHQKAK
2	20	50	KKKKRVEKVFCYYCDREFDDEKILVQHQKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30970.1	2e-65	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG057320.5