PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG057240.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 517aa    MW: 56988.9 Da    PI: 5.2343
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG057240.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.81.7e-12531341399
                       TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       +++l++p +  ++  +++ + s  ++le+++gr+++vk+    k g+++lt+GW++Fv+an+++e+  ++F + g+s+f  +v++f++
  TRIDC5BG057240.3  53 KDQLCIPWEVSSKLrDMI-PDSEPIKLETPDGRTYSVKF---VKFGQITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--NVHIFNS 134
                       567999999988887333.35567***************...6667899************************999999..9999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MDTGEIFNPG CGGPGGAGCD CEDCEEWGRY CYWNHDHGDG RPMQFLLFAS DDKDQLCIPW  60
EVSSKLRDMI PDSEPIKLET PDGRTYSVKF VKFGQITLTT GWRGFVDANH IEENNPMLFV  120
YRGNSTFNVH IFNSSGHDKS LPCSQPPCDH HVLNEQVVPH PGHVDSSAHF GYTMLPGSSV  180
TKAQDDKLLE WAHTIKSGFP LFVAAMDESN VSLNDCHVYI PLSLVGQFKE EVVKIVAPDG  240
SEYGVGAKKH NDDQIVLQSG WDKFVASQCI QQNDLLIFII EGEARLKVLV LDPSGSEKTF  300
AMGNSSNAQE KQPLPPTVTN LSSEDNEVTD LSSAYDEVVG KDTTTSRREQ RPLRSCRVEA  360
EKMGSTSCPS TKSGHRHKAG NSNEAGIEAP MPNKSYIVPQ AGATKLTVQQ EEKVKEKVRA  420
IGSEFPVFVK VMTAYDVSKI AHLAFCREYA SACRLPLEQT PLLLRLEGSS MRWSSALMVQ  480
QNNNVRRICS FWQDIVSQAG TEDSSWNWQA GAAGGSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-13B3 family protein