PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG057240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 350aa    MW: 38160.8 Da    PI: 6.0847
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG057240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-117663599
                      EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       ++le+++gr+++vk+    k g+++lt+GW++Fv+an+++e+  ++F + g+s+f  +v++f++
  TRIDC5BG057240.1  7 PIKLETPDGRTYSVKF---VKFGQITLTTGWRGFVDANHIEENNPMLFVYRGNSTF--NVHIFNS 66
                      599*************...6667899************************999999..9999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MIPDSEPIKL ETPDGRTYSV KFVKFGQITL TTGWRGFVDA NHIEENNPML FVYRGNSTFN  60
VHIFNSSGHD KSLPCSQPPC DHHVLNEQVV PHPGHVDSSA HFGYTMLPGS SVTKAQDDKL  120
LEWAHTIKSG FPLFVAAMDE SNVSLNDCHV YIPLSLVGQF KEEVVKIVAP DGSEYGVGAK  180
KHNDDQIVLQ SGWDKFVASQ CIQQNDLLIF IIEGEARLKV LVLDPSGSEK TFAMGNSSNA  240
QEKQPLPPTV TNLSSEDNEV TDLSSAYDEV VGKDTTTSRR EQRPLRSCRV EAEKMGSTSC  300
PSTKSGHKAG NSNEAGIEAP MPNKSYIVPK SGRSARAFGL GSRSLQLGPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-11B3 family protein