PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 342aa MW: 38249.8 Da PI: 6.8519

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.6	2.5e-53	89	227	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeelv++yLk+k++g ++el ++i+evd+yk+ePwdL k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++ TRIDC5BG055970.1 89 LPPGFRFHPTDEELVNYYLKRKIHGLHIEL-DIIPEVDLYKCEPWDLAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRR 180 79**************************.99**********84335556888******************************* PP NAM 92 vlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+++ + +++g+kktLv+y+grap+g++tdWvmheyrl TRIDC5BG055970.1 181 VMTQqhhggggaggGARAIGMKKTLVYYRGRAPQGVRTDWVMHEYRL 227 866666555554455**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MEISRGGRLL CLLPQPTTID PEARTRENLL IRAAGRSVKA AASSNQQEQR RRSKVRVLLF 60 RRSSYQPSCR SPEHADAVVD RRGMAPVGLP PGFRFHPTDE ELVNYYLKRK IHGLHIELDI 120 IPEVDLYKCE PWDLAEKSFL PSRDPEWYFF GPRDRKYPNG FRTNRATRAG YWKSTGKDRR 180 VMTQQHHGGG GAGGGARAIG MKKTLVYYRG RAPQGVRTDW VMHEYRLDDK DSEDTIAIQD 240 TYALCRVFKK NAICAEVEEL QEGQCSMALL EGACQQLLAG SRTTGQEYYQ TPSPDVPAGS 300 TSGGADADAD DDADKDDSWM QFISEDAWCS STAAEESTSC AG

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MEISRGGRLL CLLPQPTTID PEARTRENLL IRAAGRSVKA AASSNQQEQR RRSKVRVLLF  60
RRSSYQPSCR SPEHADAVVD RRGMAPVGLP PGFRFHPTDE ELVNYYLKRK IHGLHIELDI  120
IPEVDLYKCE PWDLAEKSFL PSRDPEWYFF GPRDRKYPNG FRTNRATRAG YWKSTGKDRR  180
VMTQQHHGGG GAGGGARAIG MKKTLVYYRG RAPQGVRTDW VMHEYRLDDK DSEDTIAIQD  240
TYALCRVFKK NAICAEVEEL QEGQCSMALL EGACQQLLAG SRTTGQEYYQ TPSPDVPAGS  300
TSGGADADAD DDADKDDSWM QFISEDAWCS STAAEESTSC AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-112	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055970.1