PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 588aa MW: 64610.8 Da PI: 7.9677

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	272	322	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.9 272 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 322 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
PQRFNSASYK DALPEILEVL RAACVTHKLP LAQTWVTCAQ QGKRGSRHSD ENYRHCISTI 60 DAACYVNDPQ MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK MEYPLSHHAK 120 IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR STCRTLRVVT 180 DKEMGDEAML EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS KESDLAELSI 240 HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD AARSLGVCPT 300 TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD 360 NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH 420 PPQAGVDLLM SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP 480 SPPKQNADAG MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF LIVKYLDDDL 540 EWVLMTCDAD LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

PQRFNSASYK DALPEILEVL RAACVTHKLP LAQTWVTCAQ QGKRGSRHSD ENYRHCISTI  60
DAACYVNDPQ MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK MEYPLSHHAK  120
IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR STCRTLRVVT  180
DKEMGDEAML EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS KESDLAELSI  240
HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD AARSLGVCPT  300
TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD  360
NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH  420
PPQAGVDLLM SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP  480
SPPKQNADAG MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF LIVKYLDDDL  540
EWVLMTCDAD LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-119	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.9