PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 592aa MW: 65010.3 Da PI: 8.074

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	276	326	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.8 276 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 326 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
NIPRATKFNS ASYKDALPEI LEVLRAACVT HKLPLAQTWV TCAQQGKRGS RHSDENYRHC 60 ISTIDAACYV NDPQMQNFHE SCSDHHLLHE QGVVGKAFTT NQPCFLPDIG SSTKMEYPLS 120 HHAKIFNLKG AVAIRLRCTR TGTADFVLEF FLPTNCEALE EQKAVLDSLS GTMRSTCRTL 180 RVVTDKEMGD EAMLEVNELS FGPQGKNKVE ELSFGDQATE HREEASWTSL AGTSKESDLA 240 ELSIHGMLSP VGQGLSPAGA QTSAQGSKGK RRTKTEKTVS LPVLRQYFAG SLKDAARSLG 300 VCPTTLKRIC RQHGINRWPS RKIKKVDHSL RKLQQIIDSV HGGETAFQLN TLYKDLTNTS 360 VSSDNNLSGS VTVPPHKQSN LTDFEGHRHH RLSSNVPSTS HSHSSCSQSS DSSPSSCSGG 420 STKHPPQAGV DLLMSGNPVN HSPVQTLQTE NASIRGHFPV QEAPDLLHNL NQQALGGQHS 480 SRSPSPPKQN ADAGMRIKAT FGSEKVRFRL KPECSFQELK QEMARRLSIV DTSFLIVKYL 540 DDDLEWVLMT CDADLQECLH VYKLANLQTV KISVHLAPIP EARVTIGHTG LS

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

NIPRATKFNS ASYKDALPEI LEVLRAACVT HKLPLAQTWV TCAQQGKRGS RHSDENYRHC  60
ISTIDAACYV NDPQMQNFHE SCSDHHLLHE QGVVGKAFTT NQPCFLPDIG SSTKMEYPLS  120
HHAKIFNLKG AVAIRLRCTR TGTADFVLEF FLPTNCEALE EQKAVLDSLS GTMRSTCRTL  180
RVVTDKEMGD EAMLEVNELS FGPQGKNKVE ELSFGDQATE HREEASWTSL AGTSKESDLA  240
ELSIHGMLSP VGQGLSPAGA QTSAQGSKGK RRTKTEKTVS LPVLRQYFAG SLKDAARSLG  300
VCPTTLKRIC RQHGINRWPS RKIKKVDHSL RKLQQIIDSV HGGETAFQLN TLYKDLTNTS  360
VSSDNNLSGS VTVPPHKQSN LTDFEGHRHH RLSSNVPSTS HSHSSCSQSS DSSPSSCSGG  420
STKHPPQAGV DLLMSGNPVN HSPVQTLQTE NASIRGHFPV QEAPDLLHNL NQQALGGQHS  480
SRSPSPPKQN ADAGMRIKAT FGSEKVRFRL KPECSFQELK QEMARRLSIV DTSFLIVKYL  540
DDDLEWVLMT CDADLQECLH VYKLANLQTV KISVHLAPIP EARVTIGHTG LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-119	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.8