PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 840aa MW: 92360 Da PI: 7.0511

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.5e-28	524	574	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.4 524 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 574 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MEGGDAPPGI SMGRAMSSEG DLDLLEQLLS GDNAWLEVAP NTSRSPNFFA SPSTFLSDAT 60 TTTTMPASTN NALWIQSGSS TVRERLDQAL DYIKEMQRDV GMLVQLWVPI KSGEGQLVLS 120 TSGQPFTLDE TSERLRQFRE VSTRYQFSAD VASESSPIGL PGRVFIGKLP EWSPDVRYFT 180 SYEYPRVNHA QYLDVHGTMG LPVFEKGSYS CLGVMELIMT RQKLNFTSEI NNICSALQAV 240 NLRSTEVSNI PRATKFNSAS YKDALPEILE VLRAACVTHK LPLAQTWVTC AQQGKRGSRH 300 SDENYRHCIS TIDAACYVND PQMQNFHESC SDHHLLHEQG VVGKAFTTNQ PCFLPDIGSS 360 TKMEYPLSHH AKIFNLKGAV AIRLRCTRTG TADFVLEFFL PTNCEALEEQ KAVLDSLSGT 420 MRSTCRTLRV VTDKEMGDEA MLEVNELSFG PQGKNKVEEL SFGDQATEHR EEASWTSLAG 480 TSKESDLAEL SIHGMLSPVG QGLSPAGAQT SAQGSKGKRR TKTEKTVSLP VLRQYFAGSL 540 KDAARSLGVC PTTLKRICRQ HGINRWPSRK IKKVDHSLRK LQQIIDSVHG GETAFQLNTL 600 YKDLTNTSVS SDNNLSGSVT VPPHKQSNLT DFEGHRHHRL SSNVPSTSHS HSSCSQSSDS 660 SPSSCSGGST KHPPQAGVDL LMSGNPVNHS PVQTLQTENA SIRGHFPVQE APDLLHNLNQ 720 QALGGQHSSR SPSPPKQNAD AGMRIKATFG SEKVRFRLKP ECSFQELKQE MARRLSIVDT 780 SFLIVKYLDD DLEWVLMTCD ADLQECLHVY KLANLQTVKI SVHLAPIPEA RVTIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MEGGDAPPGI SMGRAMSSEG DLDLLEQLLS GDNAWLEVAP NTSRSPNFFA SPSTFLSDAT  60
TTTTMPASTN NALWIQSGSS TVRERLDQAL DYIKEMQRDV GMLVQLWVPI KSGEGQLVLS  120
TSGQPFTLDE TSERLRQFRE VSTRYQFSAD VASESSPIGL PGRVFIGKLP EWSPDVRYFT  180
SYEYPRVNHA QYLDVHGTMG LPVFEKGSYS CLGVMELIMT RQKLNFTSEI NNICSALQAV  240
NLRSTEVSNI PRATKFNSAS YKDALPEILE VLRAACVTHK LPLAQTWVTC AQQGKRGSRH  300
SDENYRHCIS TIDAACYVND PQMQNFHESC SDHHLLHEQG VVGKAFTTNQ PCFLPDIGSS  360
TKMEYPLSHH AKIFNLKGAV AIRLRCTRTG TADFVLEFFL PTNCEALEEQ KAVLDSLSGT  420
MRSTCRTLRV VTDKEMGDEA MLEVNELSFG PQGKNKVEEL SFGDQATEHR EEASWTSLAG  480
TSKESDLAEL SIHGMLSPVG QGLSPAGAQT SAQGSKGKRR TKTEKTVSLP VLRQYFAGSL  540
KDAARSLGVC PTTLKRICRQ HGINRWPSRK IKKVDHSLRK LQQIIDSVHG GETAFQLNTL  600
YKDLTNTSVS SDNNLSGSVT VPPHKQSNLT DFEGHRHHRL SSNVPSTSHS HSSCSQSSDS  660
SPSSCSGGST KHPPQAGVDL LMSGNPVNHS PVQTLQTENA SIRGHFPVQE APDLLHNLNQ  720
QALGGQHSSR SPSPPKQNAD AGMRIKATFG SEKVRFRLKP ECSFQELKQE MARRLSIVDT  780
SFLIVKYLDD DLEWVLMTCD ADLQECLHVY KLANLQTVKI SVHLAPIPEA RVTIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.4