PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 518aa MW: 56755 Da PI: 7.9448

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.5	1.3e-28	202	252	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.3 202 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 252 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK MEYPLSHHAK IFNLKGAVAI 60 RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR STCRTLRVVT DKEMGDEAML 120 EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS KESDLAELSI HGMLSPVGQG 180 LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD AARSLGVCPT TLKRICRQHG 240 INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD NNLSGSVTVP 300 PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH PPQAGVDLLM 360 SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP SPPKQNADAG 420 MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF LIVKYLDDDL EWVLMTCDAD 480 LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MQNFHESCSD HHLLHEQGVV GKAFTTNQPC FLPDIGSSTK MEYPLSHHAK IFNLKGAVAI  60
RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR STCRTLRVVT DKEMGDEAML  120
EVNELSFGPQ GKNKVEELSF GDQATEHREE ASWTSLAGTS KESDLAELSI HGMLSPVGQG  180
LSPAGAQTSA QGSKGKRRTK TEKTVSLPVL RQYFAGSLKD AARSLGVCPT TLKRICRQHG  240
INRWPSRKIK KVDHSLRKLQ QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD NNLSGSVTVP  300
PHKQSNLTDF EGHRHHRLSS NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH PPQAGVDLLM  360
SGNPVNHSPV QTLQTENASI RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP SPPKQNADAG  420
MRIKATFGSE KVRFRLKPEC SFQELKQEMA RRLSIVDTSF LIVKYLDDDL EWVLMTCDAD  480
LQECLHVYKL ANLQTVKISV HLAPIPEARV TIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	9e-83	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.3