PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 916aa MW: 100589 Da PI: 7.4211

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.5	2.7e-28	600	650	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.2 600 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 650 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
FPFPSHSSSG ERRADRGAFG TNGGGLLWWS TEPFLELLLA GGGQRRARRK REGREGKSRA 60 EGGHHTITSS EGSFTCMEGG DAPPGISMGR AMSSEGDLDL LEQLLSGDNA WLEVAPNTSR 120 SPNFFASPST FLSDATTTTT MPASTNNALW IQSGSSTVRE RLDQALDYIK EMQRDVGMLV 180 QLWVPIKSGE GQLVLSTSGQ PFTLDETSER LRQFREVSTR YQFSADVASE SSPIGLPGRV 240 FIGKLPEWSP DVRYFTSYEY PRVNHAQYLD VHGTMGLPVF EKGSYSCLGV MELIMTRQKL 300 NFTSEINNIC SALQAVNLRS TEVSNIPRAT KFNSASYKDA LPEILEVLRA ACVTHKLPLA 360 QTWVTCAQQG KRGSRHSDEN YRHCISTIDA ACYVNDPQMQ NFHESCSDHH LLHEQGVVGK 420 AFTTNQPCFL PDIGSSTKME YPLSHHAKIF NLKGAVAIRL RCTRTGTADF VLEFFLPTNC 480 EALEEQKAVL DSLSGTMRST CRTLRVVTDK EMGDEAMLEV NELSFGPQGK NKVEELSFGD 540 QATEHREEAS WTSLAGTSKE SDLAELSIHG MLSPVGQGLS PAGAQTSAQG SKGKRRTKTE 600 KTVSLPVLRQ YFAGSLKDAA RSLGVCPTTL KRICRQHGIN RWPSRKIKKV DHSLRKLQQI 660 IDSVHGGETA FQLNTLYKDL TNTSVSSDNN LSGSVTVPPH KQSNLTDFEG HRHHRLSSNV 720 PSTSHSHSSC SQSSDSSPSS CSGGSTKHPP QAGVDLLMSG NPVNHSPVQT LQTENASIRG 780 HFPVQEAPDL LHNLNQQALG GQHSSRSPSP PKQNADAGMR IKATFGSEKV RFRLKPECSF 840 QELKQEMARR LSIVDTSFLI VKYLDDDLEW VLMTCDADLQ ECLHVYKLAN LQTVKISVHL 900 APIPEARVTI GHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

FPFPSHSSSG ERRADRGAFG TNGGGLLWWS TEPFLELLLA GGGQRRARRK REGREGKSRA  60
EGGHHTITSS EGSFTCMEGG DAPPGISMGR AMSSEGDLDL LEQLLSGDNA WLEVAPNTSR  120
SPNFFASPST FLSDATTTTT MPASTNNALW IQSGSSTVRE RLDQALDYIK EMQRDVGMLV  180
QLWVPIKSGE GQLVLSTSGQ PFTLDETSER LRQFREVSTR YQFSADVASE SSPIGLPGRV  240
FIGKLPEWSP DVRYFTSYEY PRVNHAQYLD VHGTMGLPVF EKGSYSCLGV MELIMTRQKL  300
NFTSEINNIC SALQAVNLRS TEVSNIPRAT KFNSASYKDA LPEILEVLRA ACVTHKLPLA  360
QTWVTCAQQG KRGSRHSDEN YRHCISTIDA ACYVNDPQMQ NFHESCSDHH LLHEQGVVGK  420
AFTTNQPCFL PDIGSSTKME YPLSHHAKIF NLKGAVAIRL RCTRTGTADF VLEFFLPTNC  480
EALEEQKAVL DSLSGTMRST CRTLRVVTDK EMGDEAMLEV NELSFGPQGK NKVEELSFGD  540
QATEHREEAS WTSLAGTSKE SDLAELSIHG MLSPVGQGLS PAGAQTSAQG SKGKRRTKTE  600
KTVSLPVLRQ YFAGSLKDAA RSLGVCPTTL KRICRQHGIN RWPSRKIKKV DHSLRKLQQI  660
IDSVHGGETA FQLNTLYKDL TNTSVSSDNN LSGSVTVPPH KQSNLTDFEG HRHHRLSSNV  720
PSTSHSHSSC SQSSDSSPSS CSGGSTKHPP QAGVDLLMSG NPVNHSPVQT LQTENASIRG  780
HFPVQEAPDL LHNLNQQALG GQHSSRSPSP PKQNADAGMR IKATFGSEKV RFRLKPECSF  840
QELKQEMARR LSIVDTSFLI VKYLDDDLEW VLMTCDADLQ ECLHVYKLAN LQTVKISVHL  900
APIPEARVTI GHTGLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	52	RRARRKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.2