PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG055240.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 597aa MW: 65656.1 Da PI: 7.8553

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG055240.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	281	331	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5BG055240.10 281 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 331 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MTSWLLLLII NQFNSASYKD ALPEILEVLR AACVTHKLPL AQTWVTCAQQ GKRGSRHSDE 60 NYRHCISTID AACYVNDPQM QNFHESCSDH HLLHEQGVVG KAFTTNQPCF LPDIGSSTKM 120 EYPLSHHAKI FNLKGAVAIR LRCTRTGTAD FVLEFFLPTN CEALEEQKAV LDSLSGTMRS 180 TCRTLRVVTD KEMGDEAMLE VNELSFGPQG KNKVEELSFG DQATEHREEA SWTSLAGTSK 240 ESDLAELSIH GMLSPVGQGL SPAGAQTSAQ GSKGKRRTKT EKTVSLPVLR QYFAGSLKDA 300 ARSLGVCPTT LKRICRQHGI NRWPSRKIKK VDHSLRKLQQ IIDSVHGGET AFQLNTLYKD 360 LTNTSVSSDN NLSGSVTVPP HKQSNLTDFE GHRHHRLSSN VPSTSHSHSS CSQSSDSSPS 420 SCSGGSTKHP PQAGVDLLMS GNPVNHSPVQ TLQTENASIR GHFPVQEAPD LLHNLNQQAL 480 GGQHSSRSPS PPKQNADAGM RIKATFGSEK VRFRLKPECS FQELKQEMAR RLSIVDTSFL 540 IVKYLDDDLE WVLMTCDADL QECLHVYKLA NLQTVKISVH LAPIPEARVT IGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MTSWLLLLII NQFNSASYKD ALPEILEVLR AACVTHKLPL AQTWVTCAQQ GKRGSRHSDE  60
NYRHCISTID AACYVNDPQM QNFHESCSDH HLLHEQGVVG KAFTTNQPCF LPDIGSSTKM  120
EYPLSHHAKI FNLKGAVAIR LRCTRTGTAD FVLEFFLPTN CEALEEQKAV LDSLSGTMRS  180
TCRTLRVVTD KEMGDEAMLE VNELSFGPQG KNKVEELSFG DQATEHREEA SWTSLAGTSK  240
ESDLAELSIH GMLSPVGQGL SPAGAQTSAQ GSKGKRRTKT EKTVSLPVLR QYFAGSLKDA  300
ARSLGVCPTT LKRICRQHGI NRWPSRKIKK VDHSLRKLQQ IIDSVHGGET AFQLNTLYKD  360
LTNTSVSSDN NLSGSVTVPP HKQSNLTDFE GHRHHRLSSN VPSTSHSHSS CSQSSDSSPS  420
SCSGGSTKHP PQAGVDLLMS GNPVNHSPVQ TLQTENASIR GHFPVQEAPD LLHNLNQQAL  480
GGQHSSRSPS PPKQNADAGM RIKATFGSEK VRFRLKPECS FQELKQEMAR RLSIVDTSFL  540
IVKYLDDDLE WVLMTCDADL QECLHVYKLA NLQTVKISVH LAPIPEARVT IGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-118	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG055240.10