PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG053690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 381aa MW: 42878.5 Da PI: 6.855 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.7 | 7.9e-52 | 17 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk ++++e++wyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s TRIDC5BG053690.1 17 MPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKLASTGETDWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPIYS 108 69***************************.89***************88888999************************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfy+gra +g ktdW+mhe+rl TRIDC5BG053690.1 109 SeGTRCIGLKKSLVFYRGRAARGIKTDWMMHEFRL 143 856667***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MEGINDVNMD KSDEIIMPGF RFHPTDEELV SFYLKKKIQQ KPISIELIRQ LDIYKFDPWD 60 LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSE GTRCIGLKKS 120 LVFYRGRAAR GIKTDWMMHE FRLPSLTDPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ 180 QMALSHTWGP PLPGTTEQDL FSAMQPVQAS HFASESSSCS LQVAEAPASQ FNSKHGFQGQ 240 QQLQKPSNTQ DGSSCKVISF NCNPSLELEG PTILPFQTQP SQKPVHTAPP LFNMQFGQPE 300 QQITGFLADS SADVNAGMSC RNQESSTMKH GNTFSMNNEL EAPGKLTFPF DLGADSSDDW 360 KCNMPWESFL SPTVPAEMPQ Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 3e-95 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG053690.1 |