PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG052620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 305aa MW: 34474.6 Da PI: 8.9699 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++k +G g+W++ ++ g+ R++k+c++rw +yl TRIDC5BG052620.1 14 KGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 67 | 153 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT.........................................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........................................tWktIartmgkgRtlkqcksrwqky 47 rg+++ eEdel+++++ +lG++ +W++Ia +++ gRt++++k++w+++ TRIDC5BG052620.1 67 RGNFSDEEDELIIKLHSLLGNKyvhrlihsiyssnertilcsalhawpcksialtvlflfderRWSLIAGRLP-GRTDNEIKNYWNTH 153 89***********************************************************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDDRLTAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF SDEEDELIIK LHSLLGNKYV HRLIHSIYSS NERTILCSAL HAWPCKSIAL 120 TVLFLFDERR WSLIAGRLPG RTDNEIKNYW NTHIRRKLTS RGIDPVTHRA INSDHAASNI 180 TISFEAAQRD DKGAVFRRDA EPTKVAAAAA AITHVDHHHR SNPHHQMEWG QGKPLKCPDL 240 NLDLCISPPS HEDPMVDTKP VVKREAVVGL CFSCSMGLPR SADCKCSSFM GLRTAMLDFR 300 SIEMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 3e-88 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG052620.1 |