PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG051980.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 633aa MW: 70928.4 Da PI: 7.3668 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 62.8 | 7.2e-20 | 546 | 633 | 1 | 91 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 l++lL++cA+av+++d+++++ ++ +l++++s +gdp qRl ay++e+L arla+s++++ykal+++e + ss+ ++++++++e++P++ TRIDC5BG051980.6 546 LKKLLISCARAVEAKDMSAVDMMVPELRKMVSVSGDPHQRLGAYIVEGLVARLASSGHSIYKALKCKEPR---SSDLMSYMHFLYEACPYF 633 5799*****************************************************************9...999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence |
MDLLTYLCDS LSSCLWISPS EGTRQALNLS YNNLPHYLKI CLLCLNMYPD GHTIWKDDLV 60 KQWVAEGFIH TTEGQDMEKV AASYFNELIN RRFIQTLCSK YNNEVLSCTV HDVVHDLIAD 120 KCSEENFNMV IDSSRRNVAL PQKVRRLSLL FGDAKCVKTP ANMRRSQVRS LTIFGLFESM 180 PSISEFKLLR VLNLQLSGYG DRNTINLTGI SDLFQLRYLK IACDICIQLP NHMLRLQCLE 240 TLVLDSEVTA VPWDIIHLPS LLHLSLLVMT NLLDWIGSMR LIGKLNNLRD LHLTYSVPSS 300 DHLKRSMEAL GSQLSGHANL KTLALVNGPC HKNAFVCDAL KVTVSWEGLV PPPVLEVFEW 360 SLHSCVLTRI PKWIGELGKL HILKIAVRDL PRDGIDAVRG LPALTALSLY LQTASVERIV 420 FDKVGFSVLN YFNLRCSVPC LKFEANAMPN LRKLKIGFNA PRARMDQHGA STAISIDHLA 480 SLKEICAKIR GACADTESAL ATAISNHPSN PMINVQFVDY TFDGDELTHE NKGQDEVLVE 540 GQDGYLKKLL ISCARAVEAK DMSAVDMMVP ELRKMVSVSG DPHQRLGAYI VEGLVARLAS 600 SGHSIYKALK CKEPRSSDLM SYMHFLYEAC PYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50600.1 | 2e-31 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG051980.6 |