PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051940.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 382aa    MW: 42638.3 Da    PI: 7.2424
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051940.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.63.5e-1263338121373
              GRAS  21 qalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervH 113
                       + ++ +l++++s +gdp qRl ay++e+L arla+s++++ykal+++e +   ss+ ++++++++e++P++kf+++ aN aI eav+ge+++H
  TRIDC5BG051940.4  33 DMMVPELRKMVSVSGDPHQRLGAYIVEGLVARLASSGHSIYKALKCKEPR---SSDLMSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDMIH 122
                       557889*******************************************9...999************************************* PP

              GRAS 114 iiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaV 204
                       iiDf+isqG+QW++LlqaLa+Rp+gpp++RiTg++++ s   +   l  +g+rL+++A  ++vpfef+  va + +++e e+L v pgEalaV
  TRIDC5BG051940.4 123 IIDFGISQGAQWIPLLQALATRPGGPPTVRITGIDDSLSAyaRGGGLDLVGRRLSHIAGLCKVPFEFHS-VAVAGDEVEEEHLMVIPGEALAV 214
                       ************************************877788999************************.7999******************* PP

              GRAS 205 nlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                       n+ l+lh+++de vs++++rd++L+lvkslsPkvv++veqe+++n+ +F +rf+e+l+yy+a+f+s++ +lpr+ ++ri +E+++l+reivn+
  TRIDC5BG051940.4 215 NFTLELHHIPDEAVSTANHRDRILRLVKSLSPKVVTLVEQELNTNTVPFKQRFAETLDYYTAIFESIDLTLPRD-DKRIDMEQHCLAREIVNI 306
                       ***********************************************************************886.679*************** PP

              GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       vacegaer+erhe ++kW+ rl+++GF+p pls+ +++++++ll+ ++ + y++ e++g l+lgWk++pLv+ SaW
  TRIDC5BG051940.4 307 VACEGAERVERHEVFGKWKGRLMMVGFRPWPLSSLVNATIRTLLQSYSAN-YQLAERDGVLYLGWKNKPLVVSSAW 381
                       ************************************************77.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MRSMRLIDHL KRSMEALGSQ LSGHANLKTL ALDMMVPELR KMVSVSGDPH QRLGAYIVEG  60
LVARLASSGH SIYKALKCKE PRSSDLMSYM HFLYEACPYF KFGYMSANGA IAEAVKGEDM  120
IHIIDFGISQ GAQWIPLLQA LATRPGGPPT VRITGIDDSL SAYARGGGLD LVGRRLSHIA  180
GLCKVPFEFH SVAVAGDEVE EEHLMVIPGE ALAVNFTLEL HHIPDEAVST ANHRDRILRL  240
VKSLSPKVVT LVEQELNTNT VPFKQRFAET LDYYTAIFES IDLTLPRDDK RIDMEQHCLA  300
REIVNIVACE GAERVERHEV FGKWKGRLMM VGFRPWPLSS LVNATIRTLL QSYSANYQLA  360
ERDGVLYLGW KNKPLVVSSA WH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-171GRAS family protein