PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG050780.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 103aa MW: 11378.3 Da PI: 7.2417 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.4 | 1.2e-07 | 3 | 33 | 4 | 34 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34 ++C+ +e+ + lfC ++ lC+ C ++ H TRIDC5BG050780.2 3 TICDVCESAVAVLFCAADEAALCRPCDEKVH 33 69**************************998 PP | |||||||
2 | zf-B_box | 27.1 | 8.6e-09 | 52 | 91 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + +C+ +e+ ++ ++C +++ lC +C ++ H g H TRIDC5BG050780.2 52 KLVRCDICESSPAFFYCDIDGTSLCLSCDMAVHVGgkrtH 91 6789****************************96655566 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence |
MRTICDVCES AVAVLFCAAD EAALCRPCDE KVHMCNKLAS RHVRVGLADP NKLVRCDICE 60 SSPAFFYCDI DGTSLCLSCD MAVHVGGKRT HGRYLLLRQR VEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-60 | DBB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG050780.2 |