PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG050430.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 399aa MW: 41381.9 Da PI: 4.7373

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG050430.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3e-35	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y+++ed++++++isw e+g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll TRIDC5BG050430.2 44 FLTKTYQLVEDPAVDDVISWGEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKRLL 127 9***************************************************************99.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k TRIDC5BG050430.2 128 CDIHRRKV 135 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAAEHGAAAA AADRAGAEPP PPAPMPGLVA SADAAGQRSL PTPFLTKTYQ LVEDPAVDDV 60 ISWGEDGSTF VVWRPAEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKIVPD RWEFANDCFR 120 RGEKRLLCDI HRRKVVQSAG LAAAAAAAAA GAVTVATAAI PMALPVTRSG SPGPQLSSEE 180 QVLSSNSGSA EELPPAAPSG SGSGLGGAAA GSSSGDMGEE NDRLRRDNAR LTRELGQMKK 240 LCNNIVSLMS KFASSQQPDG GPGSLSSVVN CSGESALAPP PPLPAGILDL MPSCSALATA 300 AGLAVDGGPE TDARLFGVSI GLKRARDEEE DGEGEELPNS NGDGADVKPE EAANRRPDGG 360 SEDRQSWPIY RPKPVYRACN GQDGAGAGSG SDQDRSNSR

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAAEHGAAAA AADRAGAEPP PPAPMPGLVA SADAAGQRSL PTPFLTKTYQ LVEDPAVDDV  60
ISWGEDGSTF VVWRPAEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKIVPD RWEFANDCFR  120
RGEKRLLCDI HRRKVVQSAG LAAAAAAAAA GAVTVATAAI PMALPVTRSG SPGPQLSSEE  180
QVLSSNSGSA EELPPAAPSG SGSGLGGAAA GSSSGDMGEE NDRLRRDNAR LTRELGQMKK  240
LCNNIVSLMS KFASSQQPDG GPGSLSSVVN CSGESALAPP PPLPAGILDL MPSCSALATA  300
AGLAVDGGPE TDARLFGVSI GLKRARDEEE DGEGEELPNS NGDGADVKPE EAANRRPDGG  360
SEDRQSWPIY RPKPVYRACN GQDGAGAGSG SDQDRSNSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	6e-75	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG050430.2