PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 205aa    MW: 22336.2 Da    PI: 5.7907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1950100256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       +y+G+r+++ +g+W+AeIrdp+    +  r++lg++ tae Aa+a+++a+++++g+
  TRIDC5BG050420.3  50 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTYPTAEAAARAYDRAARRIRGA 100
                       6********.**********75....44*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MCGGAIIYDY IPAHRRRVST ADFWPDADHS DAYSAAPDKA PRAKRGRTNQ YRGIRQRPWG  60
KWAAEIRDPV KGVRVWLGTY PTAEAAARAY DRAARRIRGA KAKVNFPNEI LVSAPAHEAS  120
CTMAAAPPAA VLPSPKKEEE GEGLEPAACS CEEVKALSEE LMAYENYMSF LGVPYMEGGA  180
AAAPAAEEAP AELWSFEDSY YPALV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-27ERF family protein