PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 213aa    MW: 22583 Da    PI: 7.4143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-173284155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++ + grWv+e+r+p ++g  +r +lg++ tae Aa+a +aa+++l g
  TRIDC5BG050140.1 32 PVYRGVRRRGNAGRWVCEVRVPGKRG--ARLWLGTYLTAEAAARANDAAMLALGG 84
                      68*******************95544..**********************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
SSVSSTPEHA SGRASPAKRP TGRTKFRETR HPVYRGVRRR GNAGRWVCEV RVPGKRGARL  60
WLGTYLTAEA AARANDAAML ALGGRSARCL NFADSAWLLA VPSALSNLAD VRRAALQAVA  120
DFQRREAANG LIARTVAKEA PSSAPAQSSS ESDSADSSET SEASADGEFE MDLGSYYVSL  180
AEALLMDPPS TAAIMDAYWD NGDGGADVAL WSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-32ERF family protein