PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047860.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 276aa    MW: 30106.7 Da    PI: 6.4038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047860.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.4e-09112159455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+  Er RR+ri +++  L++l+P +    +k   Ka iL + ++Y++sLq
  TRIDC5BG047860.6 112 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 159
                       799***********************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE  60
DTASLNSAHS KETKESTRKR GGKKQGKEVD EEEEEPKGYI HVRARRGQAT DSHSLSERVR  120
RERISERMRM LQSLVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG  180
MESGAALSDQ SQKIEGMFHE AAALPTGPPM NRSSSPAPSQ AMMDTGTSSS SPPYSLQGTQ  240
DNGSSSSSYM MQTVGEPRHE LFNQVMFSNY MCSFQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15487KKRKPKEDTASLNSAHSKETKESTRKRGGKKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-34bHLH family protein