PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 611aa    MW: 67853.8 Da    PI: 10.2107
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.8e-084286246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.2 42 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 86
                      68*****************************99**********96 PP
2Myb_DNA-binding43.76.2e-1495139248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.2  95 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 139
                       68*****************88.*********.************975 PP
3Myb_DNA-binding44.43.8e-14147192248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.2 147 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 192
                       8******************************.************986 PP
4Myb_DNA-binding34.44.9e-11199242246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.2 199 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 242
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
PVLNANQVCV CICVFNWPVL IQEIVILFSR WLNHDDPLIN HNAWTACEEK RLILTVQEKG  60
MHNWINIAVA LGTQRTPFQC LARYQRSLNP HILKRTWTKE EDLQLLAAVQ TYGCNWQLVS  120
ANLVGRIGNQ CSNRYRKTLI PERKRVGRWS EDEDKRLMVS VKLFRSGSWN KIAQFVPGRT  180
QSQCSERWRN VLDPDIEHGE WRPEEDSKLL ASVHEVGPCW SKIAGAMIPH RTDNMCLRRW  240
KRLCQDELPL MIAANQVKKS IFQTNFVDRE TERPAICPSD FPSLVYSKVD KGDENTVSDQ  300
VKKPRKRSRK SSVDNVPPND PSKSSADAAA VNTTKRKSRK KLSGIGAENQ TGEDITVSDG  360
VNNSSRGHSR ARKRKVTTDG DVVVQTRMRG SISVDNELTL DILGGPISFD DEAPTNQKRD  420
PTSVGKEGTA KKRTRGSVSV GNEGPVKKKM RGSISVGDGR AVKNRMRGSV SIDNQGNTTK  480
RKRVSRKSAK GNSKTDGEVN TCEMDLPSVP SEAAAERGID TGNTNKMKRK STPRPKLINM  540
AEGTVDEYSR LADCISFARG NGTSKNNSVM PINNAMQSGG PSGENPQVAI SARLDPTSIE  600
NGSSPNTQVV D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1302310KKPRKRSRK
2430436AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-89MYB family protein