PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG047620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 19674 Da PI: 10.7533 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.5 | 5.5e-19 | 23 | 94 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e ++ yfFs+r+ +g r++rat gyWkatgk+k+v+++ k+ lvg+k+ L+f++g++ +tdWvmheyrl TRIDC5BG047620.1 23 SEGESAYFFSQRQG---RGGRRRRATG-GYWKATGKEKPVFVQlpvgKRLLVGVKTALAFHRGKS----RTDWVMHEYRL 94 355678****9876...5889999977.**************999977778**********6544....79*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MTAHMEIVKL ISFRFRLIAA GASEGESAYF FSQRQGRGGR RRRATGGYWK ATGKEKPVFV 60 QLPVGKRLLV GVKTALAFHR GKSRTDWVMH EYRLAGAADQ NKRANGGSQS SEWVVCRVSM 120 KSRARRSAAG GETTGDHQQE QPSPSPSSTS SCVTDHTCHA PDQEEVSSST SHCQQHPTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 9e-19 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG047620.1 |