PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG046390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 86aa MW: 9574.8 Da PI: 9.0043

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG046390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	65.3	1.5e-20	39	85	1	47
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47 +CaaCk+lrr+C ++C+lapyfpa++p+++anvh++FGasnv +ll+ TRIDC5BG046390.1 39 RCAACKYLRRRCGHGCALAPYFPASRPRRYANVHRVFGASNVARLLQ 85 6******************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence
LTRRSIARSI TMSTAGNEVE PEELQEEEEE EGGGGNPRRC AACKYLRRRC GHGCALAPYF 60 PASRPRRYAN VHRVFGASNV ARLLQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	3e-21	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG046390.1