PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG045910.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 366aa MW: 38483.1 Da PI: 5.0207

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG045910.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.7	2e-08	190	237	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i ++ L++l+P + +k Ka +L + ++Y++sLq TRIDC5BG045910.4 190 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 237 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MDGDYVSGLL MGSAGLDFGV PGLDAGFFET LCGAGGAGLA AMFGDRAAGM PGFGGPFGPA 60 EGGGGGGELG AASREGSSVS DPAWAHGANA RKRKAPAAGA GKGKEAASCF AKMGEPTGPD 120 SKKCKIEDET VRPKVEEEAA TATASDGSAG GERGRKQAKG KGSKSKQPAA DEPPRDYVHV 180 RARRGQATDS HSLAERVRRE KITLKMKMLQ DLVPGCNKVI GKALMLDEII NYVQSLQQQV 240 EFLSMKLSTV NPQLDFDTLS NLLHKDMNQA LGPSASTVFP LESAGTVYPL CDQADLYQSF 300 SSGAMENQCS MGLLDMALPP APQYPFQKQQ QDFWEAGAQN GLHMDHEQSQ ENAGQLQAAD 360 HPEIEF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MDGDYVSGLL MGSAGLDFGV PGLDAGFFET LCGAGGAGLA AMFGDRAAGM PGFGGPFGPA  60
EGGGGGGELG AASREGSSVS DPAWAHGANA RKRKAPAAGA GKGKEAASCF AKMGEPTGPD  120
SKKCKIEDET VRPKVEEEAA TATASDGSAG GERGRKQAKG KGSKSKQPAA DEPPRDYVHV  180
RARRGQATDS HSLAERVRRE KITLKMKMLQ DLVPGCNKVI GKALMLDEII NYVQSLQQQV  240
EFLSMKLSTV NPQLDFDTLS NLLHKDMNQA LGPSASTVFP LESAGTVYPL CDQADLYQSF  300
SSGAMENQCS MGLLDMALPP APQYPFQKQQ QDFWEAGAQN GLHMDHEQSQ ENAGQLQAAD  360
HPEIEF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	125	RKRKAPAAGAGKGKEAASCFAKMGEPTGPDSKKCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG045910.4