PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG045360.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 360aa MW: 39304.4 Da PI: 9.5455

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG045360.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.2	2.2e-55	21	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+ k+++ ++++ ++i+evd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++ TRIDC5BG045360.2 21 LPPGFRFHPTDEELITYYLRGKIADGSFTA-RAITEVDLNKCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIF 112 79***********************999.89***********99999************************************ PP NAM 94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +elvg+kktLvfykgrap+gek++Wvmheyrl TRIDC5BG045360.2 113 TGqppsAQELVGMKKTLVFYKGRAPRGEKSNWVMHEYRL 151 9888877888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
GGGGAAVSKK KSSKEGEEES LPPGFRFHPT DEELITYYLR GKIADGSFTA RAITEVDLNK 60 CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ 120 ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP 180 SSTNAHSRSH HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG 240 LHPHIQPHPA GAGYLNPPGP FTLSSLNLNL GGPSPAMPSP HHVLHHAMSM PMGQQQQQAG 300 GANGQAMTME QHMAAGLGGI PAAGGDGGFG GEGHAAGGAG MRYQNLDVDQ MVERYWPGSY

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

GGGGAAVSKK KSSKEGEEES LPPGFRFHPT DEELITYYLR GKIADGSFTA RAITEVDLNK  60
CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ  120
ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP  180
SSTNAHSRSH HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG  240
LHPHIQPHPA GAGYLNPPGP FTLSSLNLNL GGPSPAMPSP HHVLHHAMSM PMGQQQQQAG  300
GANGQAMTME QHMAAGLGGI PAAGGDGGFG GEGHAAGGAG MRYQNLDVDQ MVERYWPGSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	2e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG045360.2