PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG043800.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 162aa    MW: 18420.9 Da    PI: 10.0618
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG043800.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-133681655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  TRIDC5BG043800.9 36 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 81
                      689*********************6....4679****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
SKPSPEIAAI EKFLQFQDSV PCKIRAKRGC ATHPRSIAER VRRTKISERI RKLQELVPNM  60
EKQTNTSDML DLAVDYIKEL QMQVKGDEGR PGELHLRGGQ AAEELRQLTD QARRRPFPSL  120
HDRGSGRRGA EDQWHAVINQ STIPSSSRKQ EVELVVVLHE GH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-44bHLH family protein