PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG042480.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 159aa    MW: 17425.8 Da    PI: 5.2554
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG042480.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC170.22.3e-53161191101
             NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 
                       ql++fw++q   ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd
  TRIDC5BG042480.3  16 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 108
                       89******99999******************************************************************************** PP

             NF-YC  91 flvdivprdel 101
                       flvdivprd+ 
  TRIDC5BG042480.3 109 FLVDIVPRDDA 119
                       ********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
GAAAAQQAAA QQQQQQLQVF WAEQYREIEA TTDFKNHNLP LARIKKIMKA DEDVRMIAAE  60
APVVFARACE MFILELTHRG WAHAEENKRR TLQKSDIAAA IARTEVFDFL VDIVPRDDAK  120
DAEAAAAAAM ATAAAGIPRP AAGVPATDPS MAYYYVPQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18995RRTLQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.11e-59NF-YC family protein