PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG041610.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 262aa    MW: 29193.4 Da    PI: 6.9233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG041610.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.41.1e-173483255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      + +h++ E+rRR++iN++f+ Lr+llP+     ++K +Ka+ L +++eYI+ Lq
  TRIDC5BG041610.6 34 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 83
                      578*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
VQLAMKWAEL AVRVDAKGGS CSGSGTDQLP NTPKSKHSAT EQRRRSKIND RFQILRDLLP  60
HTDQKRDKAT FLLEVIEYIR FLQEKAQKYE ASFPEWNQEN AKLLPWSNMY FRSSWKNAQS  120
KGQIAEDASP DPSQFIRNGA SPGFNITGKL DDNHTAVASA AISGAPDQAE TDHMASVSCR  180
SADTPTNIMN NVSPQSQPQW ANPSGVDDCA VNSDVLNNQQ LMIDEGTISV SSQYSQEYVT  240
KNTTIFSIVR RYLSIRYQNP AC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-47bHLH family protein