PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041610.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 507aa MW: 54340.1 Da PI: 8.1595

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.1	2.8e-17	222	271	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +h++ E+rRR++iN++f+ Lr+llP+ ++K +Ka+ L +++eYI+ Lq TRIDC5BG041610.2 222 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 271 578***********************8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
RVYAGNKGTH DFLSLYAPAA AAAAKDSSLQ LHDSKPPAAS QGFFLKTHDF LQPLEKPAAS 60 AQSGADRQQQ QPQTTKHALP GGIGTFSVTQ QAPGAAGPQS AAAAAVVVVK PEPPPFVLWG 120 QPTASQPPRA QGHHHQWTLP FAGAGQAATA SRKHPAERKR RSGGGFMDSG SRSSGGAGFD 180 DDDGLAARRE VSSSLQELAV RVDAKGGSCS GSGTDQLPNT PKSKHSATEQ RRRSKINDRF 240 QILRDLLPHT DQKRDKATFL LEVIEYIRFL QEKAQKYEAS FPEWNQENAK LLPWSNMYFR 300 SSWKNAQSKG QIAEDASPDP SQFIRNGASP GFNITGKLDD NHTAVASAAI SGAPDQAETD 360 HMASVSCRSA DTPTNIMNNV SPQSQPQWAN PSGVDDCAVN SDVLNNQQLM IDEGTISVSS 420 QYSQELLNTL THALQSSGID LSQANISVQI NLGKRAVKRP TAGQSSSFKE HIDLAPTNEM 480 MGHQQTMLGN AAEELPHAAK RYKPGNT

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

RVYAGNKGTH DFLSLYAPAA AAAAKDSSLQ LHDSKPPAAS QGFFLKTHDF LQPLEKPAAS  60
AQSGADRQQQ QPQTTKHALP GGIGTFSVTQ QAPGAAGPQS AAAAAVVVVK PEPPPFVLWG  120
QPTASQPPRA QGHHHQWTLP FAGAGQAATA SRKHPAERKR RSGGGFMDSG SRSSGGAGFD  180
DDDGLAARRE VSSSLQELAV RVDAKGGSCS GSGTDQLPNT PKSKHSATEQ RRRSKINDRF  240
QILRDLLPHT DQKRDKATFL LEVIEYIRFL QEKAQKYEAS FPEWNQENAK LLPWSNMYFR  300
SSWKNAQSKG QIAEDASPDP SQFIRNGASP GFNITGKLDD NHTAVASAAI SGAPDQAETD  360
HMASVSCRSA DTPTNIMNNV SPQSQPQWAN PSGVDDCAVN SDVLNNQQLM IDEGTISVSS  420
QYSQELLNTL THALQSSGID LSQANISVQI NLGKRAVKRP TAGQSSSFKE HIDLAPTNEM  480
MGHQQTMLGN AAEELPHAAK RYKPGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	5e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG041610.2