PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG041520.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 313aa    MW: 33904.3 Da    PI: 10.2982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG041520.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.2e-1085133355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIDC5BG041520.3  85 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 133
                       58*************************9....556*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
DCSSKGSDSK KRRRPSEVMG GDQVQSSNVA ADSANESAQS KDKGEESSPA TGTTTGGKSK  60
GKGAKESSEK EDYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV  120
MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLLRFPGVSS SSMGFSPEMM  180
HPQLQLSQPG LMQGGAAAMA NSDVFRRIMQ AQLGAKDGSH SQDGPRIEWP VQRSRCADGV  240
PVHGLLALPL AGPQHQAVPG RLPNVTGDAF ASPARDLRLR ATRPEFVCPA SRPSYQSSDR  300
QRDGLQRPHA RAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-55bHLH family protein