PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG041520.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 276aa    MW: 29511 Da    PI: 9.085
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG041520.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-1097145355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIDC5BG041520.2  97 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 145
                       58*************************9....556*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
SGGVPSSEAA GGDCSSKGSD SKKRRRPSEV MGGDQVQSSN VAADSANESA QSKDKGEESS  60
PATGTTTGGK SKGKGAKESS EKEDYIHVRA RRGQATNSHS LAERLRREKI SERMKLLQDL  120
VPGCSKVTGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP RLDLNIEGLL SKDLLRFPGV  180
SSSSMGFSPE MMHPQLQLSQ PGLMQGGAAA MANSDVFRRI MQAQLGAKDG SHSQMAHALN  240
GPFSDHVAQM AYPSMGSSHS HSQDLSIRPS QDAYQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.32e-57bHLH family protein