PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041520.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 407aa MW: 42332.2 Da PI: 7.3647

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041520.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.8	1.1e-09	269	317	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq TRIDC5BG041520.1 269 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 317 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
PGCLSGSFGQ RRNPFAQLVV GAGAMDMNES SEKGMEGNGS SGPGGGIPVE WQSQFSGGGF 60 SAHQHQQHPH MMDSFGSGMW SAASQHGAGF LAPVPGFLPP PGLGGHFPVD SGFIERAARS 120 SCFVGPGAGG GMMGAGAFGG AGDQQMGSAF GEGYLDHRRK EGGDKAEPEL AGSGGVPSSE 180 AAGGDCSSKG SDSKKRRRPS EVMGGDQVQS SNVAADSANE SAQSKDKGEE SSPATGTTTG 240 GKSKGKGAKE SSEKEDYIHV RARRGQATNS HSLAERLRRE KISERMKLLQ DLVPGCSKVT 300 GKAVMLDEII NYVQSLQRQV EFLSMKLATV NPRLDLNIEG LLSKDLLRFP GVSSSSMGFS 360 PEMMHPQLQL SQPGLMQGGA AAMANSDVFR RIMQAQLGAK DGSHSQV

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

PGCLSGSFGQ RRNPFAQLVV GAGAMDMNES SEKGMEGNGS SGPGGGIPVE WQSQFSGGGF  60
SAHQHQQHPH MMDSFGSGMW SAASQHGAGF LAPVPGFLPP PGLGGHFPVD SGFIERAARS  120
SCFVGPGAGG GMMGAGAFGG AGDQQMGSAF GEGYLDHRRK EGGDKAEPEL AGSGGVPSSE  180
AAGGDCSSKG SDSKKRRRPS EVMGGDQVQS SNVAADSANE SAQSKDKGEE SSPATGTTTG  240
GKSKGKGAKE SSEKEDYIHV RARRGQATNS HSLAERLRRE KISERMKLLQ DLVPGCSKVT  300
GKAVMLDEII NYVQSLQRQV EFLSMKLATV NPRLDLNIEG LLSKDLLRFP GVSSSSMGFS  360
PEMMHPQLQL SQPGLMQGGA AAMANSDVFR RIMQAQLGAK DGSHSQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG041520.1