PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041450.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1107aa MW: 120363 Da PI: 4.632

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	341	363	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5BG041450.3 341 ECKKCNLTFEDQSAYVQHQLSfH 363 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1107 aa Download sequence
RGRRDADLLP PPKIDRAVFN ESAGSRKQTF SRRRAATNLP HNLTPSTASS SAVAAPTEED 60 SENRLIVFHL QQLFARDDPS YLPPPPPIPL QQLPPIPIPA PTIPVPTPPV ASVPIQQLPD 120 PDRDLTNPKG VAVDLARLAE LVDPYGEEIR NRTAGLALES ELLGFMNELE GQWGSRRRRR 180 KFVEAAIFGD HLPRRWKLIL GIKRKERAAW INCRRYVSPR GHQFATCREV SSYFMSLLGY 240 VEAKPTTVQN NDMGVRDLSA VNVGVRDLSA VNVGVQNNDV GVRDLSAVNT AGLHQQNDST 300 RDMQSAVSAT SVTLSIHNGD SQGQRQKPYK DEAPIEAVRK ECKKCNLTFE DQSAYVQHQL 360 SFHQRKAKRR KVDKSIGLGV SKDGKLETQE SQRTSEDKPG YFGHGVADVK SQGQSPAELF 420 GGASSGDVGA QLSLAAAPCG LQEITALPEQ VEEPSAGEPV SGHQDLPQET TGLPQQEKEL 480 SATEPFAGHQ KEHVDNSGDH EIHDGACHIA EEPLAFDVGS NLSTCKSPEP EVHEHDSSKD 540 LEFSIADCSG SFDRSHEISK IPQDVPCTAD APGEKSCSDD PMDCADITLP KQVPEHCDML 600 DHKFRGFPGG TGFNDQVGNN PLSANLDEPD LSSNSMEVDN SKIACKFGDM LNSTSSEYDK 660 PVVDQIDRGV TALKNDAINI DDGMNIDVRI KEVNLNSCLD TISSPVSGAN CETSNALHDG 720 NRSSILAQCF GGSSNDDNVC QDESFVNQNN VSKAEIFVNQ SNDMVYQSNL NMNPISPPQI 780 SVDYFTNCSM NSEIKNNDNR RDDNAKEQFV NSRNISSNEP GFDAEAYNND IFTGAMAETS 840 FAQLNNAMNM KTDYSSCYSI SDLNTLTGGT ATDGIDFHGM RSSFVSGSTS RSEPNELDFD 900 IKGSMLEALE RSDSDLETQY NGGDPAIDSL PAAGTSGTSV DDFMSMHTNF GSLTSLVRSV 960 EGGPMSRLIQ DQCDLQLGFG AQKQQIYPSF EEHLRMASAG APQFGNMGRH NPMPVPVPVP 1020 EPTLMLGYEP TLMLGYAPQF GSCPPVQLGW DLSKMVGVLQ SVCVWCNTRF QHFGTAEQQN 1080 DSVGFICPAC KDKTSGHLGT LNNGSLL

Sequence ? help Back to Top

Protein Sequence Length: 1107 aa Download sequence

RGRRDADLLP PPKIDRAVFN ESAGSRKQTF SRRRAATNLP HNLTPSTASS SAVAAPTEED  60
SENRLIVFHL QQLFARDDPS YLPPPPPIPL QQLPPIPIPA PTIPVPTPPV ASVPIQQLPD  120
PDRDLTNPKG VAVDLARLAE LVDPYGEEIR NRTAGLALES ELLGFMNELE GQWGSRRRRR  180
KFVEAAIFGD HLPRRWKLIL GIKRKERAAW INCRRYVSPR GHQFATCREV SSYFMSLLGY  240
VEAKPTTVQN NDMGVRDLSA VNVGVRDLSA VNVGVQNNDV GVRDLSAVNT AGLHQQNDST  300
RDMQSAVSAT SVTLSIHNGD SQGQRQKPYK DEAPIEAVRK ECKKCNLTFE DQSAYVQHQL  360
SFHQRKAKRR KVDKSIGLGV SKDGKLETQE SQRTSEDKPG YFGHGVADVK SQGQSPAELF  420
GGASSGDVGA QLSLAAAPCG LQEITALPEQ VEEPSAGEPV SGHQDLPQET TGLPQQEKEL  480
SATEPFAGHQ KEHVDNSGDH EIHDGACHIA EEPLAFDVGS NLSTCKSPEP EVHEHDSSKD  540
LEFSIADCSG SFDRSHEISK IPQDVPCTAD APGEKSCSDD PMDCADITLP KQVPEHCDML  600
DHKFRGFPGG TGFNDQVGNN PLSANLDEPD LSSNSMEVDN SKIACKFGDM LNSTSSEYDK  660
PVVDQIDRGV TALKNDAINI DDGMNIDVRI KEVNLNSCLD TISSPVSGAN CETSNALHDG  720
NRSSILAQCF GGSSNDDNVC QDESFVNQNN VSKAEIFVNQ SNDMVYQSNL NMNPISPPQI  780
SVDYFTNCSM NSEIKNNDNR RDDNAKEQFV NSRNISSNEP GFDAEAYNND IFTGAMAETS  840
FAQLNNAMNM KTDYSSCYSI SDLNTLTGGT ATDGIDFHGM RSSFVSGSTS RSEPNELDFD  900
IKGSMLEALE RSDSDLETQY NGGDPAIDSL PAAGTSGTSV DDFMSMHTNF GSLTSLVRSV  960
EGGPMSRLIQ DQCDLQLGFG AQKQQIYPSF EEHLRMASAG APQFGNMGRH NPMPVPVPVP  1020
EPTLMLGYEP TLMLGYAPQF GSCPPVQLGW DLSKMVGVLQ SVCVWCNTRF QHFGTAEQQN  1080
DSVGFICPAC KDKTSGHLGT LNNGSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	205	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
2	177	206	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
3	178	207	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
4	364	371	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5BG041450.3