PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041450.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1081aa MW: 117572 Da PI: 4.62

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041450.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	315	337	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5BG041450.2 315 ECKKCNLTFEDQSAYVQHQLSfH 337 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1081 aa Download sequence
PPPKIDRAVF NESAGSRKQT FSRRRAATNL PHNLTPSTAS SSAVAAPTEE DSENRLIVFH 60 LQQLFARDDP SYLPPPPPIP LQQLPPIPIP APTIPVPTPP VASVPIQQLP DPDRDLTNPK 120 GVAVDLARLA ELVDPYGEEI RNRTAGLALE SELLGFMNEL EGQWGSRRRR RKFVEAAIFG 180 DHLPRRWKLI LGIKRKERAA WINCRRYVSP RGHQFATCRE VSSYFMSLLG YVEAKPTTVQ 240 NNDMGVRDLS AVNVGVRDLS AVNTAGLHQQ NDSTRDMQSA VSATSVTLSI HNGDSQGQRQ 300 KPYKDEAPIE AVRKECKKCN LTFEDQSAYV QHQLSFHQRK AKRRKVDKSI GLGVSKDGKL 360 ETQESQRTSE DKPGYFGHGV ADVKSQGQSP AELFGGASSG DVGAQLSLAA APCGLQEITA 420 LPEQVEEPSA GEPVSGHQDL PQETTGLPQQ EKELSATEPF AGHQKEHVDN SGDHEIHDGA 480 CHIAEEPLAF DVGSNLSTCK SPEPEVHEHD SSKDLEFSIA DCSGSFDRSH EISKIPQDVP 540 CTADAPGEKS CSDDPMDCAD ITLPKQVPEH CDMLDHKFRG FPGGTGFNDQ VGNNPLSANL 600 DEPDLSSNSM EVDNSKIACK FGDMLNSTSS EYDKPVVDQI DRGVTALKND AINIDDGMNI 660 DVRIKEVNLN SCLDTISSPV SGANCETSNA LHDGNRSSIL AQCFGGSSND DNVCQDESFV 720 NQNNVSKAEI FVNQSNDMVY QSNLNMNPIS PPQISVDYFT NCSMNSEIKN NDNRRDDNAK 780 EQFVNSRNIS SNEPGFDAEA YNNDIFTGAM AETSFAQLNN AMNMKTDYSS CYSISDLNTL 840 TGGTATDGID FHGMRSSFVS GSTSRSEPNE LDFDIKGSML EALERSDSDL ETQYNGGDPA 900 IDSLPAAGTS GTSVDDFMSM HTNFGSLTSL VRSVEGGPMS RLIQDQCDLQ LGFGAQKQQI 960 YPSFEEHLRM ASAGAPQFGN MGRHNPMPVP VPVPEPTLML GYEPTLMLGY APQFGSCPPV 1020 QLGWDLSKMV GVLQSVCVWC NTRFQHFGTA EQQNDSVGFI CPACKDKTSG HLGTLNNGSL 1080 L

Sequence ? help Back to Top

Protein Sequence Length: 1081 aa Download sequence

PPPKIDRAVF NESAGSRKQT FSRRRAATNL PHNLTPSTAS SSAVAAPTEE DSENRLIVFH  60
LQQLFARDDP SYLPPPPPIP LQQLPPIPIP APTIPVPTPP VASVPIQQLP DPDRDLTNPK  120
GVAVDLARLA ELVDPYGEEI RNRTAGLALE SELLGFMNEL EGQWGSRRRR RKFVEAAIFG  180
DHLPRRWKLI LGIKRKERAA WINCRRYVSP RGHQFATCRE VSSYFMSLLG YVEAKPTTVQ  240
NNDMGVRDLS AVNVGVRDLS AVNTAGLHQQ NDSTRDMQSA VSATSVTLSI HNGDSQGQRQ  300
KPYKDEAPIE AVRKECKKCN LTFEDQSAYV QHQLSFHQRK AKRRKVDKSI GLGVSKDGKL  360
ETQESQRTSE DKPGYFGHGV ADVKSQGQSP AELFGGASSG DVGAQLSLAA APCGLQEITA  420
LPEQVEEPSA GEPVSGHQDL PQETTGLPQQ EKELSATEPF AGHQKEHVDN SGDHEIHDGA  480
CHIAEEPLAF DVGSNLSTCK SPEPEVHEHD SSKDLEFSIA DCSGSFDRSH EISKIPQDVP  540
CTADAPGEKS CSDDPMDCAD ITLPKQVPEH CDMLDHKFRG FPGGTGFNDQ VGNNPLSANL  600
DEPDLSSNSM EVDNSKIACK FGDMLNSTSS EYDKPVVDQI DRGVTALKND AINIDDGMNI  660
DVRIKEVNLN SCLDTISSPV SGANCETSNA LHDGNRSSIL AQCFGGSSND DNVCQDESFV  720
NQNNVSKAEI FVNQSNDMVY QSNLNMNPIS PPQISVDYFT NCSMNSEIKN NDNRRDDNAK  780
EQFVNSRNIS SNEPGFDAEA YNNDIFTGAM AETSFAQLNN AMNMKTDYSS CYSISDLNTL  840
TGGTATDGID FHGMRSSFVS GSTSRSEPNE LDFDIKGSML EALERSDSDL ETQYNGGDPA  900
IDSLPAAGTS GTSVDDFMSM HTNFGSLTSL VRSVEGGPMS RLIQDQCDLQ LGFGAQKQQI  960
YPSFEEHLRM ASAGAPQFGN MGRHNPMPVP VPVPEPTLML GYEPTLMLGY APQFGSCPPV  1020
QLGWDLSKMV GVLQSVCVWC NTRFQHFGTA EQQNDSVGFI CPACKDKTSG HLGTLNNGSL  1080
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	196	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
2	168	197	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
3	169	198	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
4	338	345	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5BG041450.2