PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG041240.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 206aa    MW: 23429.6 Da    PI: 8.1261
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG041240.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.14.9e-1241120190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ evGF +r  k  ++  ng+  +++ vC + gk+e+e+++         + r +  a+l++++++dg w+v++ +  H+He+ 
  TRIDC5BG041240.8  41 EFYNLYSWEVGFGIRYGKGMQN-VNGTKCMQEIVCGCAGKPERENSS---------SMRSNYAAMLRLHRTDDGGWYVSENRASHTHEML 120
                       6****************99988.78889999*********9987666.........8899999************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
RLRLTPPSAL AGSTGFDDRG TEVVVNPVLG TIFDSLAEAY EFYNLYSWEV GFGIRYGKGM  60
QNVNGTKCMQ EIVCGCAGKP ERENSSSMRS NYAAMLRLHR TDDGGWYVSE NRASHTHEML  120
RTCAEKLHWP SHRHIDTYTR DLVKQLRQNN VNLGKVYNII ASLFGQMENV PFTKRCLRTF  180
CGKLSKEQAD DDVRKTMDAF SEIFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.13e-10FAR1 family protein