PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 235aa    MW: 25208.5 Da    PI: 6.3944
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-08161201954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  TRIDC5BG039650.2 161 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 201
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDFDLLMSSS PEAQLALMNT MLQLEQALND QSMMMGETSP PISPVQTPSQ SLSPPPHVST  60
TCATADASYF YHQDLQTQAA AAGYAGTGGV HQEYVVSPGA AVFDGAGGTP QGYSSPSSSD  120
AMREMIFHIA ALQPVEVDPE AVRPPKRRNV RTSKDPQSVA ARLRRERISE RIRVLQRLVP  180
GGTKMDTASM LDEAIHYVKF LKSQVQSLEL AAAATGAAAH RAAAFAYPAL QHAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143148RPPKRR
2162167RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.16e-42bHLH family protein