PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038590.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 312aa    MW: 32727.6 Da    PI: 5.8451
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038590.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.36.6e-1497143354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++ e++k+L
  TRIDC5BG038590.2  97 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVLEHVKEL 143
                       78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
CTGATRTPRA CCPPGSGFGV GGYACDVVGQ AGGVFGFGFE AAVVAAQQQH HQQRAAEAAA  60
AGGSKAVVSG LLGSLQAELG RMNAGEIMDA KALAASRSHS EAERRRRQRI NGHLARLRSL  120
LPNTTKTDKA SLLAEVLEHV KELKRQTSAM TMMAAAVGGD EDDNAAPVQM LPTEADELSV  180
DAAEDGEGRL VVRASLCCED RPDLIPDIIR ALAALRLRAH RAEITTLGGR VRSVLLITAE  240
EGEEGGDEGG DGIDEECTAS HWRHECIASV QEALRGVMDR RAACSNDTSS SGGGGSIKRQ  300
RMNYGAHEQC SV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-51bHLH family protein