PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG037970.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 444aa MW: 44526.9 Da PI: 6.7421

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG037970.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6.1e-12	242	287	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC5BG037970.4 242 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 287 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MAAAGQISLD DLRSGHAGVN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG TKPEDGAQAD 60 GMQQQLFGGP YDDSVMLASR LRQHQISGGP GGGAASAKQM VLRQLADLRQ GHHNNMLLQG 120 MGRSPSIGGG GGEGGLLLPL TLGNGGSGGD VQALLKAAAN SAGGDAGVFG GFAGSLQQQQ 180 HFQPHPQQQT APMPSQTFGG VGGAPGGGAQ PQQQAGGGGG GGAPAPPRQR VRARRGQATD 240 PHSIAERLRR ERIAERMKAL QELVPNANKT DKASMLDEII DYVKFLQLQV KVLSMSRLGG 300 AAAVAPLVAD MSSEGRGGAA GGAADGSDGL TVTEQQVAKL MEEDMGAAMQ YLQGKGLCLM 360 PVSLASAISS ATCQLRPPAA AAGGPFTAAQ HMSAAMRMSV GDGGVPASPS MSVLTAQSAM 420 ANGGACANDG EGSHPKDAAS VSKP

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MAAAGQISLD DLRSGHAGVN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG TKPEDGAQAD  60
GMQQQLFGGP YDDSVMLASR LRQHQISGGP GGGAASAKQM VLRQLADLRQ GHHNNMLLQG  120
MGRSPSIGGG GGEGGLLLPL TLGNGGSGGD VQALLKAAAN SAGGDAGVFG GFAGSLQQQQ  180
HFQPHPQQQT APMPSQTFGG VGGAPGGGAQ PQQQAGGGGG GGAPAPPRQR VRARRGQATD  240
PHSIAERLRR ERIAERMKAL QELVPNANKT DKASMLDEII DYVKFLQLQV KVLSMSRLGG  300
AAAVAPLVAD MSSEGRGGAA GGAADGSDGL TVTEQQVAKL MEEDMGAAMQ YLQGKGLCLM  360
PVSLASAISS ATCQLRPPAA AAGGPFTAAQ HMSAAMRMSV GDGGVPASPS MSVLTAQSAM  420
ANGGACANDG EGSHPKDAAS VSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	252	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	7e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG037970.4