PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG037970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 461aa MW: 46335 Da PI: 6.6496

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG037970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7e-12	244	292	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a ++ +Ka++L + ++Y+k Lq TRIDC5BG037970.3 244 HSIAERLRRERIAERMKALQELVPNA--NKVMQTDKASMLDEIIDYVKFLQ 292 99*********************7..48888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MQAMAAAGQI SLDDLRSGHA GVNNGGAGGV HDDFLDQMFG SLPPSAWHDL AAGTKPEDGA 60 QADGMQQQLF GGPYDDSVML ASRLRQHQIS GGPGGGAASA KQMVLRQLAD LRQGHHNNML 120 LQGMGRSPSI GGGGGEGGLL LPLTLGNGGS GGDVQALLKA AANSAGGDAG VFGGFAGSLQ 180 QQQHFQPHPQ QTAPMPSQTF GGVGGAPGGG AQPQQQAGGG GGGGAPAPPR QRVRARRGQA 240 TDPHSIAERL RRERIAERMK ALQELVPNAN KVMQTDKASM LDEIIDYVKF LQLQVKASYA 300 MHDGLISTVL SMSRLGGAAA VAPLVADMSS EGRGGAAGGA ADGSDGLTVT EQQVAKLMEE 360 DMGAAMQYLQ GKGLCLMPVS LASAISSATC QLRPPAAAAG GPFTAAQHMS AAMRMSVGDG 420 GVPASPSMSV LTAQSAMANG GACANDGEGS HPKDAASVSK P

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MQAMAAAGQI SLDDLRSGHA GVNNGGAGGV HDDFLDQMFG SLPPSAWHDL AAGTKPEDGA  60
QADGMQQQLF GGPYDDSVML ASRLRQHQIS GGPGGGAASA KQMVLRQLAD LRQGHHNNML  120
LQGMGRSPSI GGGGGEGGLL LPLTLGNGGS GGDVQALLKA AANSAGGDAG VFGGFAGSLQ  180
QQQHFQPHPQ QTAPMPSQTF GGVGGAPGGG AQPQQQAGGG GGGGAPAPPR QRVRARRGQA  240
TDPHSIAERL RRERIAERMK ALQELVPNAN KVMQTDKASM LDEIIDYVKF LQLQVKASYA  300
MHDGLISTVL SMSRLGGAAA VAPLVADMSS EGRGGAAGGA ADGSDGLTVT EQQVAKLMEE  360
DMGAAMQYLQ GKGLCLMPVS LASAISSATC QLRPPAAAAG GPFTAAQHMS AAMRMSVGDG  420
GVPASPSMSV LTAQSAMANG GACANDGEGS HPKDAASVSK P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	254	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-41	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG037970.3