PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG037630.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 432aa    MW: 48903.5 Da    PI: 8.7919
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG037630.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.5e-05323342221
                       EETTTTEEESSHHHHHHHHH CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                       +C++C  +F+r s+L+ H++
  TRIDC5BG037630.2 323 SCNICQVTFNRESDLVFHLN 342
                       6*****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MEFSRRGPAT DDAGDGHRFP DPPSHGEAML VMRDALLWQL QKDRLRQEII VAELAKIECA  60
TALRAVSGHH GTPMPRDSMP QHRGPVFGWE HYADVGEEND VKLPSNYGRQ SAESRFWNPA  120
VEDRAEKCCS PCKCRVNSGE HNSAFDEQKP RDSSENVPPD KASPAEKWEL TGITIPVKKP  180
KPPMSPRKRK KPPTRWICPV CQVQVNSAQK HCAGKKHQSN IATLESNIKA IGYQKIRKPP  240
LAGCSICQVM CGSESNLEIH LTGKRHLKKI QALFEESNNK LHMEASCKEG SNNDMTKNIA  300
SQEAKSDESN VPEHAEKPPS AQSCNICQVT FNRESDLVFH LNGKRHLKKF WALLEESKNK  360
AMNSESQTAN MNQDSVPQHA EKTNCELNWE SYLRLRDEKH QLNVQPHAKK SVTTIWRRTL  420
CHRKQSCMRK MC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186192PRKRKKP
2187191RKRKK