PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG035270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 262aa    MW: 28782.2 Da    PI: 7.3686
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG035270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1111.7e-34102188389
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgk 89 
                        ++drhski T++g RdRR+Rls+++a+ fF+Lqd+LGfdk+skt++WLl+q+kpai+ l ++s  +a ++ e+++ss s+  +++g+
  TRIDC5BG035270.1 102 FRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDQLGFDKASKTVDWLLTQSKPAIDRLSESSRLNAARAgEDGMSSLSSV-EREGR 188
                       689************************************************************7766655554444443333.22222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLPYHPNPHG FWISREPPAQ VPNPASGFAV APPAHLDHQI QHYDHFFPGH GNQFNSETLE  60
AVLMRPRPPA PPPAEMPPAN EARTGAVQAA GTGHARARKR PFRTDRHSKI RTAQGVRDRR  120
MRLSLDVARD FFALQDQLGF DKASKTVDWL LTQSKPAIDR LSESSRLNAA RAGEDGMSSL  180
SSVEREGRRL KETELATGSG KGAADVEKAM RARGGGTSVL MEHRREMNGG LMSASMTGGE  240
YYYDLGEMMC INAGECDDDG EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.22e-27TCP family protein