PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG034820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 282aa    MW: 30995 Da    PI: 5.1983
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG034820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.83e-141461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+e+d++lv      G  +W+++++  g+ R++k+c++rw +yl
  TRIDC5BG034820.3 14 KGPWTAEDDQKLVSFLLSNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                      79******************************99************97 PP
2Myb_DNA-binding56.46.6e-1870111447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        + eE++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
  TRIDC5BG034820.3  70 LSDEEEKTVIDLHEQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                       589****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE DDQKLVSFLL SNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDEEEKTVID LHEQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPATHKPLQ PAAVATYQHP QRPTGGESPE QKVPAAAATG SQSGAEEDMF CPDEVPTMMQ  180
LLDNIILPCD VVEPAPLDSS CGTASSPAES SSSSSSASAA SSGGGGFEDD WLPKIMEWPV  240
EPMFMMGLDV DVVTGPTSAW EFEDAFNAYQ RIALFDHQET WA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.18e-88MYB family protein