PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG034820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 206aa    MW: 23187.6 Da    PI: 10.882
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG034820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.8e-141461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+e+d++lv      G  +W+++++  g+ R++k+c++rw +yl
  TRIDC5BG034820.2 14 KGPWTAEDDQKLVSFLLSNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                      79******************************99************97 PP
2Myb_DNA-binding57.14e-1870111447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        + eE++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
  TRIDC5BG034820.2  70 LSDEEEKTVIDLHEQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                       589****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE DDQKLVSFLL SNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDEEEKTVID LHEQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPATHKPLQ PAAVATYQHP QRPTGGESPE QKVPAAAATG SQSGAEEDMF CPDERRRSTA  180
AAARLRHQPS RPRPRRPPRR RRAAAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195202RRPPRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.17e-89MYB family protein