PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG034650.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 396aa MW: 40016.5 Da PI: 10.0195

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG034650.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.7e-32	255	308	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC5BG034650.2 255 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 308 9****************************************************7 PP
2	Myb_DNA-binding	46.7	7.3e-15	256	307	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC5BG034650.2 256 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 307 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
SSAASPDLSL HISLPSTGPP TGPGGGGGGR GPVGGGGGDP WRRLNGSTAS TELSLSPPLL 60 AADQEGAALP WRHRPSSSAA ASSAATTSAQ AALITMPMLQ PLDAGVGGAS AAPPIRGIPI 120 YNGAGGFPFL PPAPGGGEGH HLPKVGFYSY HHPAAWPSSL GSTSPSSLGP GPAPPANSFD 180 PTAAFLSSAA HHRMLSASGR LNGMLSDTLR SYGAPGGGVG MGLGGHHHHL HGAQPFGLGS 240 RFMPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK 300 SHLQMYRTVK STDKPAASAG PTDGGSGDDD FPSAGGQAGS GGDNNMCPRP FPEHRSTSEG 360 TASSVGGGGD MDQSSAGNAS TKWSNSSRYR TSSSHM

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

SSAASPDLSL HISLPSTGPP TGPGGGGGGR GPVGGGGGDP WRRLNGSTAS TELSLSPPLL  60
AADQEGAALP WRHRPSSSAA ASSAATTSAQ AALITMPMLQ PLDAGVGGAS AAPPIRGIPI  120
YNGAGGFPFL PPAPGGGEGH HLPKVGFYSY HHPAAWPSSL GSTSPSSLGP GPAPPANSFD  180
PTAAFLSSAA HHRMLSASGR LNGMLSDTLR SYGAPGGGVG MGLGGHHHHL HGAQPFGLGS  240
RFMPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK  300
SHLQMYRTVK STDKPAASAG PTDGGSGDDD FPSAGGQAGS GGDNNMCPRP FPEHRSTSEG  360
TASSVGGGGD MDQSSAGNAS TKWSNSSRYR TSSSHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	36	GGGGRGPVGGG
2	27	37	GGGGRGPVGGG
3	28	38	GGGGRGPVGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-48	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG034650.2