PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG033760.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 847aa MW: 96430.9 Da PI: 7.1128

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG033760.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.6	2.7e-25	95	183	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s+ksk +++i++ +fvCskeg+++e++ +k+r++ a+ r gC+a+l+v ++ d+kw+ tkl++eHnHe+ TRIDC5BG033760.8 95 FYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVaGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEV 183 9************************************999887646777888899****************************96 PP
2	FAR1	62.3	1.4e-19	217	303	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA ++GF+vr+++s+ks ++++ ++ ++vCs++ +++ ++++ ++r +r gC a +++ ++++g w+v+kl leH+Hel+p TRIDC5BG033760.8 217 FYYSYAIRAGFEVRVRQSRKS-QDESLKMLKLVCSRHRYHSGRENN--GDDTKRDPSRDGCSALFEIIRKDKGIWRVSKLILEHTHELNP 303 9*****************9.6777***********99988..88899999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MEVGGQAMME PQGVELEDDS INFWASLGVS THVHGVDQMA LHNVHILDHQ GQSLPPAVVS 60 HPESVCKELF PVEVDPCLEP RVGMEFESGE AAKTFYIAYA GRVGFSVRIA RSRKSKCSES 120 IIMLRFVCSK EGFSKEKRVV AGKKTRKRLA SIREGCNAML EVLRRGDNKW VATKLVKEHN 180 HEVGMPSTVH YIATESDTMV DPYIDMEFES LESAKTFYYS YAIRAGFEVR VRQSRKSQDE 240 SLKMLKLVCS RHRYHSGREN NGDDTKRDPS RDGCSALFEI IRKDKGIWRV SKLILEHTHE 300 LNPAPASSVC CVRSQGEILV IAKNFADTRN LLLNGQDSQP RREIRYNDLG PEDAQSLLEY 360 LKKVQAEDPA FFYAVQLDKN EDTVNIFWAD ASARMAYYHF GDAVKFETAY RSNKEHIPIV 420 IFSGVNHHVQ PVIFGCALLV EESEESFVWL FEKWLEAMHV RPPVSFVTEL NQEMAAAAAK 480 VLPDTCHIFC EKHILGTVKE ELHSIYPGLD HFITDLRKCI DGCRIEESFE SCWESVLMKH 540 GFRNNEHLQS LYDIRKRWAP AYTKQSFHAR NLLAQSCENL EKIIDTYFSS KTQLQVAVQQ 600 LEQAICNFHA KEAQADYLTM FQLPALRTAS PVEKQAGLVF SRKVFDIFQE QFAESFGYHA 660 ERLEDRMLHK YRLTVDDGDE EAHIVSFSPD QTTVCCSCCL FESCGILCRH ALRVFIIEGV 720 RFLPKAYVLK RWTKHAKSTV TLDNYIELRG YCEDPSTSRY NDLCYDAIKC AKEGSTSTER 780 YKIAKEALCK ALDEIMPTRN IREQNSQNCT TSLKSPVKKF GTAKGTSGKS IKRPAFKNSL 840 VESNGNR

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MEVGGQAMME PQGVELEDDS INFWASLGVS THVHGVDQMA LHNVHILDHQ GQSLPPAVVS  60
HPESVCKELF PVEVDPCLEP RVGMEFESGE AAKTFYIAYA GRVGFSVRIA RSRKSKCSES  120
IIMLRFVCSK EGFSKEKRVV AGKKTRKRLA SIREGCNAML EVLRRGDNKW VATKLVKEHN  180
HEVGMPSTVH YIATESDTMV DPYIDMEFES LESAKTFYYS YAIRAGFEVR VRQSRKSQDE  240
SLKMLKLVCS RHRYHSGREN NGDDTKRDPS RDGCSALFEI IRKDKGIWRV SKLILEHTHE  300
LNPAPASSVC CVRSQGEILV IAKNFADTRN LLLNGQDSQP RREIRYNDLG PEDAQSLLEY  360
LKKVQAEDPA FFYAVQLDKN EDTVNIFWAD ASARMAYYHF GDAVKFETAY RSNKEHIPIV  420
IFSGVNHHVQ PVIFGCALLV EESEESFVWL FEKWLEAMHV RPPVSFVTEL NQEMAAAAAK  480
VLPDTCHIFC EKHILGTVKE ELHSIYPGLD HFITDLRKCI DGCRIEESFE SCWESVLMKH  540
GFRNNEHLQS LYDIRKRWAP AYTKQSFHAR NLLAQSCENL EKIIDTYFSS KTQLQVAVQQ  600
LEQAICNFHA KEAQADYLTM FQLPALRTAS PVEKQAGLVF SRKVFDIFQE QFAESFGYHA  660
ERLEDRMLHK YRLTVDDGDE EAHIVSFSPD QTTVCCSCCL FESCGILCRH ALRVFIIEGV  720
RFLPKAYVLK RWTKHAKSTV TLDNYIELRG YCEDPSTSRY NDLCYDAIKC AKEGSTSTER  780
YKIAKEALCK ALDEIMPTRN IREQNSQNCT TSLKSPVKKF GTAKGTSGKS IKRPAFKNSL  840
VESNGNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG033760.8